PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_151.30
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 320aa    MW: 35861.5 Da    PI: 7.1823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_151.30genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-1878126355
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   y+G+r+++ +g+W+AeIrdp++     r++lg+f ta+eAa+a+++ ++k++g
  evm.model.supercontig_151.30  78 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAKEAARAYDREARKIRG 126
                                   9*******.**********954...4************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.28877134IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-3177135IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-2277135IPR016177DNA-binding domain
SMARTSM003809.4E-3777140IPR001471AP2/ERF domain
PfamPF008473.8E-1178126IPR001471AP2/ERF domain
PRINTSPR003673.2E-117889IPR001471AP2/ERF domain
CDDcd000185.68E-3178135No hitNo description
PRINTSPR003673.2E-11100116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MCGGAIIADF IPRNRSRRIT AFDLWPGSPF ANFNCNDSEK KLSRPEPPRQ EPVSFKRTLP  60
TSGDEVEKKA KRQRKNLYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTA KEAARAYDRE  120
ARKIRGKKAK VNFPNEDDEF TVPTQTQKSN HNPPAIWNPA PPPYQTQNPR ANFNSIDFEF  180
GYDLNQVGGS FSRNSTGFNE NHAANAMSNE AVICCCEENS GTGTRSGSEC GYSYSPGFTG  240
CNQNSNNNGG VRVKEEEQEE EENEVRKLSE ELMAYENYMK FYQIPYLDGQ SPAQNTAAQE  300
SVVGDLWSFD DAPVTSGAV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-2078134360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-2078134663ATERF1
3gcc_A1e-2078134663ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16873KAKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891869.11e-109PREDICTED: ethylene-responsive transcription factor ERF071
TrEMBLM5VKI01e-106M5VKI0_PRUPE; Uncharacterized protein
STRINGGLYMA02G01960.11e-100(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-40ethylene-responsive element binding protein